I tried installing the requirements.txt but pip complained that mkl
is not available. I commented the 'mkl' line on requirements.txt
and proceeded:
pip
ipython
# mkl <========
psutil
pyserial ~= 3.5
but the script failed to instal pyfftw:
Building wheels for collected packages: pyfftw, PyQt5-sip
Building wheel for pyfftw (pyproject.toml) ... error
error: subprocess-exited-with-error
× Building wheel for pyfftw (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> [41 lines of output]
running bdist_wheel
running build
running build_py
creating build
creating build/lib.macosx-11.0-arm64-3.8
creating build/lib.macosx-11.0-arm64-3.8/pyfftw
copying pyfftw/config.py -> build/lib.macosx-11.0-arm64-3.8/pyfftw
copying pyfftw/_version.py -> build/lib.macosx-11.0-arm64-3.8/pyfftw
copying pyfftw/__init__.py -> build/lib.macosx-11.0-arm64-3.8/pyfftw
creating build/lib.macosx-11.0-arm64-3.8/pyfftw/builders
copying pyfftw/builders/builders.py -> build/lib.macosx-11.0-arm64-3.8/pyfftw/builders
copying pyfftw/builders/__init__.py -> build/lib.macosx-11.0-arm64-3.8/pyfftw/builders
copying pyfftw/builders/_utils.py -> build/lib.macosx-11.0-arm64-3.8/pyfftw/builders
creating build/lib.macosx-11.0-arm64-3.8/pyfftw/interfaces
copying pyfftw/interfaces/cache.py -> build/lib.macosx-11.0-arm64-3.8/pyfftw/interfaces
copying pyfftw/interfaces/__init__.py -> build/lib.macosx-11.0-arm64-3.8/pyfftw/interfaces
copying pyfftw/interfaces/scipy_fft.py -> build/lib.macosx-11.0-arm64-3.8/pyfftw/interfaces
copying pyfftw/interfaces/dask_fft.py -> build/lib.macosx-11.0-arm64-3.8/pyfftw/interfaces
copying pyfftw/interfaces/numpy_fft.py -> build/lib.macosx-11.0-arm64-3.8/pyfftw/interfaces
copying pyfftw/interfaces/scipy_fftpack.py -> build/lib.macosx-11.0-arm64-3.8/pyfftw/interfaces
copying pyfftw/interfaces/_utils.py -> build/lib.macosx-11.0-arm64-3.8/pyfftw/interfaces
UPDATING build/lib.macosx-11.0-arm64-3.8/pyfftw/_version.py
set build/lib.macosx-11.0-arm64-3.8/pyfftw/_version.py to '0.13.1'
running build_ext
DEBUG:__main__:Link FFTW dynamically
DEBUG:__main__:Compiler include_dirs: ['/Users/erickmartinez/anaconda3/envs/lia/include/python3.8']
DEBUG:__main__:3.8.10 | packaged by conda-forge | (default, Sep 13 2021, 21:14:52)
[Clang 11.1.0 ]
DEBUG:__main__:Sniffer include_dirs: ['/private/var/folders/zv/mhnhzlt95zv5c8fqm65sykmw0000gn/T/pip-install-ehsq7wc0/pyfftw_eccb08eed9964fc98b6ab7187e04ac99/include', '/private/var/folders/zv/mhnhzlt95zv5c8fqm65sykmw0000gn/T/pip-install-ehsq7wc0/pyfftw_eccb08eed9964fc98b6ab7187e04ac99/pyfftw', '/private/var/folders/zv/mhnhzlt95zv5c8fqm65sykmw0000gn/T/pip-build-env-jy26bx7y/overlay/lib/python3.8/site-packages/numpy/core/include', '/Users/erickmartinez/anaconda3/envs/lia/include']
DEBUG:__main__:objects: []
DEBUG:__main__:libraries: []
DEBUG:__main__:include dirs: ['/private/var/folders/zv/mhnhzlt95zv5c8fqm65sykmw0000gn/T/pip-install-ehsq7wc0/pyfftw_eccb08eed9964fc98b6ab7187e04ac99/include', '/private/var/folders/zv/mhnhzlt95zv5c8fqm65sykmw0000gn/T/pip-install-ehsq7wc0/pyfftw_eccb08eed9964fc98b6ab7187e04ac99/pyfftw', '/private/var/folders/zv/mhnhzlt95zv5c8fqm65sykmw0000gn/T/pip-build-env-jy26bx7y/overlay/lib/python3.8/site-packages/numpy/core/include', '/Users/erickmartinez/anaconda3/envs/lia/include']
/var/folders/zv/mhnhzlt95zv5c8fqm65sykmw0000gn/T/pyfftw-9uhqjrgx/None.c:1:10: fatal error: 'fftw3.h' file not found
#include <fftw3.h>
^~~~~~~~~
1 error generated.
WARNING:__main__:Compilation error: command '/usr/bin/gcc' failed with exit code 1
DEBUG:__main__:gcc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/Users/erickmartinez/anaconda3/envs/lia/include -arch arm64 -I/Users/erickmartinez/anaconda3/envs/lia/include -arch arm64 -I/private/var/folders/zv/mhnhzlt95zv5c8fqm65sykmw0000gn/T/pip-install-ehsq7wc0/pyfftw_eccb08eed9964fc98b6ab7187e04ac99/include -I/private/var/folders/zv/mhnhzlt95zv5c8fqm65sykmw0000gn/T/pip-install-ehsq7wc0/pyfftw_eccb08eed9964fc98b6ab7187e04ac99/pyfftw -I/private/var/folders/zv/mhnhzlt95zv5c8fqm65sykmw0000gn/T/pip-build-env-jy26bx7y/overlay/lib/python3.8/site-packages/numpy/core/include -I/Users/erickmartinez/anaconda3/envs/lia/include -I/Users/erickmartinez/anaconda3/envs/lia/include/python3.8 -c /var/folders/zv/mhnhzlt95zv5c8fqm65sykmw0000gn/T/pyfftw-9uhqjrgx/None.c -o /var/folders/zv/mhnhzlt95zv5c8fqm65sykmw0000gn/T/pyfftw-9uhqjrgx/None.o
DEBUG:__main__:Checking with includes ['fftw3.h']...no
error: Could not find the FFTW header 'fftw3.h'
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for pyfftw
Building wheel for PyQt5-sip (pyproject.toml) ... done
Created wheel for PyQt5-sip: filename=PyQt5_sip-12.13.0-cp38-cp38-macosx_11_0_arm64.whl size=79592 sha256=ba4d613bd71a360a2d6abc3a6d303639f9c4f926305eba696c51b8150b631d09
Stored in directory: /Users/erickmartinez/Library/Caches/pip/wheels/7f/3f/55/593da8d20b5c2810baf2a81c8ae78449b348f09c83111c51a3
Successfully built PyQt5-sip
Failed to build pyfftw
ERROR: Could not build wheels for pyfftw, which is required to install pyproject.toml-based projects
I think fftw can be installed via conda:
pyFFTW/pyFFTW#316 (comment)
but I am not sure if you need mkl.