crobisaur / crobthesissetupubuntu1204

This is a description (for myself) on how to seet up Ubuntu 12.04 with Caffe neural network framework & python3.5 + packages for my thesis experiments.

crobThesisSetupUbuntu1204

This is a description (for myself) on how to seet up Ubuntu 12.04 with Caffe neural network framework & python3.5 + packages for my thesis experiments.

1. First thing is to follow this guide here (https://github.com/BVLC/caffe/wiki/Install-Caffe-on-EC2-from-scratch-%28Ubuntu,-CUDA-7,-cuDNN%29) on how to install Caffe on Ubuntu 12.04

2. Next set up any IDE you wish to use, pycharm in my case

3. Next install python3.5 (http://askubuntu.com/questions/682869/install-python-3-5-on-vivid-using-apt-get)

4. sudo add-apt-repository ppa:fkrull/deadsnakes sudo apt-get update sudo apt-get install python3.5

5. Once all that is taken care of, install packages needed for thesis work:

6. Numpy

7. Scipy

8. matplotlib

9. sci-kit learn

10. sci-kit image

11. h5py

12. pillow

13. tiffile.py (only needed for reading in raw data files)

14. Install packages via: (http://stackoverflow.com/questions/18785063/install-numpy-in-python-virtualenv)

15. ex: virtualenv ~/.venvdir/venv/ && ~/.venvdir/venv/bin/pip3.5 install foo

16. pyqt5 sudo apt-get install qtcreator pyqt5-dev-tools