conda-forge / searvey-feedstock Goto Github PK
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License: BSD 3-Clause "New" or "Revised" License
A conda-smithy repository for searvey.
License: BSD 3-Clause "New" or "Revised" License
The get_usgs_stations()
function throws an error in 0.3.2:
python -c 'import searvey.usgs; searvey.usgs.get_usgs_stations()'
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/home/panos/miniconda/envs/removeme/lib/python3.10/site-packages/searvey/usgs.py", line 209, in get_usgs_stations
usgs_stations = _get_all_usgs_stations()
File "/home/panos/miniconda/envs/removeme/lib/python3.10/site-packages/searvey/usgs.py", line 153, in _get_all_usgs_stations
func_kwargs=[
File "/home/panos/miniconda/envs/removeme/lib/python3.10/site-packages/searvey/usgs.py", line 156, in <listcomp>
"output": set(j for i in _get_usgs_output_codes().values() for j in i),
File "/home/panos/miniconda/envs/removeme/lib/python3.10/site-packages/searvey/usgs.py", line 101, in _get_usgs_output_codes
df_param_info = _get_usgs_output_info()
File "/home/panos/miniconda/envs/removeme/lib/python3.10/site-packages/searvey/usgs.py", line 89, in _get_usgs_output_info
df_param_cd, _ = nwis.get_pmcodes(var)
File "/home/panos/miniconda/envs/removeme/lib/python3.10/site-packages/dataretrieval/nwis.py", line 459, in get_pmcodes
return _read_rdb(response.text), _set_metadata(response, **kwargs)
File "/home/panos/miniconda/envs/removeme/lib/python3.10/site-packages/dataretrieval/nwis.py", line 713, in _read_rdb
df = pd.read_csv(StringIO(rdb), delimiter='\t', skiprows=count + 2,
File "/home/panos/miniconda/envs/removeme/lib/python3.10/site-packages/pandas/util/_decorators.py", line 211, in wrapper
return func(*args, **kwargs)
File "/home/panos/miniconda/envs/removeme/lib/python3.10/site-packages/pandas/util/_decorators.py", line 331, in wrapper
return func(*args, **kwargs)
File "/home/panos/miniconda/envs/removeme/lib/python3.10/site-packages/pandas/io/parsers/readers.py", line 950, in read_csv
return _read(filepath_or_buffer, kwds)
File "/home/panos/miniconda/envs/removeme/lib/python3.10/site-packages/pandas/io/parsers/readers.py", line 611, in _read
return parser.read(nrows)
File "/home/panos/miniconda/envs/removeme/lib/python3.10/site-packages/pandas/io/parsers/readers.py", line 1778, in read
) = self._engine.read( # type: ignore[attr-defined]
File "/home/panos/miniconda/envs/removeme/lib/python3.10/site-packages/pandas/io/parsers/c_parser_wrapper.py", line 230, in read
chunks = self._reader.read_low_memory(nrows)
File "pandas/_libs/parsers.pyx", line 808, in pandas._libs.parsers.TextReader.read_low_memory
File "pandas/_libs/parsers.pyx", line 866, in pandas._libs.parsers.TextReader._read_rows
File "pandas/_libs/parsers.pyx", line 852, in pandas._libs.parsers.TextReader._tokenize_rows
File "pandas/_libs/parsers.pyx", line 1973, in pandas._libs.parsers.raise_parser_error
pandas.errors.ParserError: Error tokenizing data. C error: Expected 1 fields in line 362, saw 3
name: removeme
channels:
- gbrey
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- asttokens=2.2.1=pyhd8ed1ab_0
- attrs=22.2.0=pyh71513ae_0
- backcall=0.2.0=pyh9f0ad1d_0
- backports=1.0=pyhd8ed1ab_3
- backports.functools_lru_cache=1.6.4=pyhd8ed1ab_0
- beautifulsoup4=4.12.0=pyha770c72_0
- blosc=1.21.3=hafa529b_0
- boost-cpp=1.78.0=h75c5d50_1
- branca=0.6.0=pyhd8ed1ab_0
- brotli=1.0.9=h166bdaf_8
- brotli-bin=1.0.9=h166bdaf_8
- brotlipy=0.7.0=py310h5764c6d_1005
- bzip2=1.0.8=h7f98852_4
- c-ares=1.18.1=h7f98852_0
- ca-certificates=2022.12.7=ha878542_0
- cairo=1.16.0=ha61ee94_1014
- certifi=2022.12.7=pyhd8ed1ab_0
- cffi=1.15.1=py310h255011f_3
- cfitsio=4.2.0=hd9d235c_0
- charset-normalizer=2.1.1=pyhd8ed1ab_0
- click=8.1.3=unix_pyhd8ed1ab_2
- click-plugins=1.1.1=py_0
- cligj=0.7.2=pyhd8ed1ab_1
- colorama=0.4.6=pyhd8ed1ab_0
- contourpy=1.0.7=py310hdf3cbec_0
- cryptography=40.0.1=py310h34c0648_0
- curl=7.88.1=hdc1c0ab_1
- cycler=0.11.0=pyhd8ed1ab_0
- dataretrieval=0.7=pyhd8ed1ab_0
- decorator=5.1.1=pyhd8ed1ab_0
- deprecated=1.2.13=pyh6c4a22f_0
- erddapy=1.2.1=pyhd8ed1ab_0
- exceptiongroup=1.1.1=pyhd8ed1ab_0
- executing=1.2.0=pyhd8ed1ab_0
- expat=2.5.0=hcb278e6_1
- fiona=1.9.2=py310ha325b7b_0
- folium=0.14.0=pyhd8ed1ab_0
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=3.000=h77eed37_0
- font-ttf-source-code-pro=2.038=h77eed37_0
- font-ttf-ubuntu=0.83=hab24e00_0
- fontconfig=2.14.2=h14ed4e7_0
- fonts-conda-ecosystem=1=0
- fonts-conda-forge=1=0
- fonttools=4.39.3=py310h1fa729e_0
- freetype=2.12.1=hca18f0e_1
- freexl=1.0.6=h166bdaf_1
- gdal=3.6.3=py310hbad6b5a_6
- geopandas=0.12.2=pyhd8ed1ab_0
- geopandas-base=0.12.2=pyha770c72_0
- geos=3.11.2=hcb278e6_0
- geotiff=1.7.1=h480ec47_8
- gettext=0.21.1=h27087fc_0
- giflib=5.2.1=h0b41bf4_3
- hdf4=4.2.15=h501b40f_6
- hdf5=1.14.0=nompi_hb72d44e_103
- html5lib=1.1=pyh9f0ad1d_0
- icu=70.1=h27087fc_0
- idna=3.4=pyhd8ed1ab_0
- importlib-metadata=6.1.0=pyha770c72_0
- iniconfig=2.0.0=pyhd8ed1ab_0
- ipython=8.12.0=pyh41d4057_0
- jedi=0.18.2=pyhd8ed1ab_0
- jinja2=3.1.2=pyhd8ed1ab_1
- joblib=1.2.0=pyhd8ed1ab_0
- json-c=0.16=hc379101_0
- kealib=1.5.0=he7a6254_1
- keyutils=1.6.1=h166bdaf_0
- kiwisolver=1.4.4=py310hbf28c38_1
- krb5=1.20.1=h81ceb04_0
- lcms2=2.15=haa2dc70_1
- ld_impl_linux-64=2.40=h41732ed_0
- lerc=4.0.0=h27087fc_0
- libaec=1.0.6=hcb278e6_1
- libblas=3.9.0=16_linux64_openblas
- libbrotlicommon=1.0.9=h166bdaf_8
- libbrotlidec=1.0.9=h166bdaf_8
- libbrotlienc=1.0.9=h166bdaf_8
- libcblas=3.9.0=16_linux64_openblas
- libcurl=7.88.1=hdc1c0ab_1
- libdeflate=1.18=h0b41bf4_0
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libexpat=2.5.0=hcb278e6_1
- libffi=3.4.2=h7f98852_5
- libgcc-ng=12.2.0=h65d4601_19
- libgdal=3.6.3=h73bb59c_6
- libgfortran-ng=12.2.0=h69a702a_19
- libgfortran5=12.2.0=h337968e_19
- libglib=2.74.1=h606061b_1
- libgomp=12.2.0=h65d4601_19
- libiconv=1.17=h166bdaf_0
- libjpeg-turbo=2.1.5.1=h0b41bf4_0
- libkml=1.3.0=h37653c0_1015
- liblapack=3.9.0=16_linux64_openblas
- libnetcdf=4.9.2=nompi_hf3f8848_103
- libnghttp2=1.52.0=h61bc06f_0
- libnsl=2.0.0=h7f98852_0
- libopenblas=0.3.21=pthreads_h78a6416_3
- libpng=1.6.39=h753d276_0
- libpq=15.2=hb675445_0
- librttopo=1.1.0=h0d5128d_13
- libspatialindex=1.9.3=h9c3ff4c_4
- libspatialite=5.0.1=h7d1ca68_25
- libsqlite=3.40.0=h753d276_0
- libssh2=1.10.0=hf14f497_3
- libstdcxx-ng=12.2.0=h46fd767_19
- libtiff=4.5.0=ha587672_6
- libuuid=2.38.1=h0b41bf4_0
- libwebp-base=1.3.0=h0b41bf4_0
- libxcb=1.13=h7f98852_1004
- libxml2=2.10.3=hca2bb57_4
- libxslt=1.1.37=h873f0b0_0
- libzip=1.9.2=hc929e4a_1
- libzlib=1.2.13=h166bdaf_4
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- matplotlib-base=3.7.1=py310he60537e_0
- matplotlib-inline=0.1.6=pyhd8ed1ab_0
- munch=2.5.0=py_0
- munkres=1.1.4=pyh9f0ad1d_0
- ncurses=6.3=h27087fc_1
- networkx=3.0=pyhd8ed1ab_0
- nspr=4.35=h27087fc_0
- nss=3.89=he45b914_0
- numpy=1.24.2=py310h8deb116_0
- openjpeg=2.5.0=hfec8fc6_2
- openssl=3.1.0=h0b41bf4_0
- packaging=23.0=pyhd8ed1ab_0
- pandas=1.5.3=py310h9b08913_1
- parso=0.8.3=pyhd8ed1ab_0
- pcre2=10.40=hc3806b6_0
- pexpect=4.8.0=pyh1a96a4e_2
- pickleshare=0.7.5=py_1003
- pillow=9.4.0=py310h065c6d2_2
- pip=23.0.1=pyhd8ed1ab_0
- pixman=0.40.0=h36c2ea0_0
- platformdirs=3.2.0=pyhd8ed1ab_0
- pluggy=1.0.0=pyhd8ed1ab_5
- pooch=1.7.0=pyha770c72_3
- poppler=23.03.0=hf052cbe_1
- poppler-data=0.4.12=hd8ed1ab_0
- postgresql=15.2=h3248436_0
- proj=9.2.0=h8ffa02c_0
- prompt-toolkit=3.0.38=pyha770c72_0
- prompt_toolkit=3.0.38=hd8ed1ab_0
- pthread-stubs=0.4=h36c2ea0_1001
- ptyprocess=0.7.0=pyhd3deb0d_0
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- pycparser=2.21=pyhd8ed1ab_0
- pydantic=1.10.7=py310h1fa729e_0
- pygments=2.14.0=pyhd8ed1ab_0
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- pyproj=3.5.0=py310hb814896_1
- pysocks=1.7.1=pyha2e5f31_6
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- python=3.10.10=he550d4f_0_cpython
- python-dateutil=2.8.2=pyhd8ed1ab_0
- python_abi=3.10=3_cp310
- pytz=2023.3=pyhd8ed1ab_0
- readline=8.2=h8228510_1
- requests=2.28.2=pyhd8ed1ab_0
- rtree=1.0.1=py310hbdcdc62_1
- scikit-learn=1.2.2=py310h41b6a48_1
- scipy=1.10.1=py310h8deb116_0
- searvey=0.3.2=pyhd8ed1ab_0
- setuptools=67.6.1=pyhd8ed1ab_0
- shapely=2.0.1=py310h056c13c_1
- six=1.16.0=pyh6c4a22f_0
- snappy=1.1.10=h9fff704_0
- soupsieve=2.3.2.post1=pyhd8ed1ab_0
- sqlite=3.40.0=h4ff8645_0
- stack_data=0.6.2=pyhd8ed1ab_0
- threadpoolctl=3.1.0=pyh8a188c0_0
- tiledb=2.13.2=hd532e3d_0
- tk=8.6.12=h27826a3_0
- tomli=2.0.1=pyhd8ed1ab_0
- tqdm=4.65.0=pyhd8ed1ab_1
- traitlets=5.9.0=pyhd8ed1ab_0
- typing-extensions=4.5.0=hd8ed1ab_0
- typing_extensions=4.5.0=pyha770c72_0
- tzcode=2023c=h0b41bf4_0
- tzdata=2023c=h71feb2d_0
- unicodedata2=15.0.0=py310h5764c6d_0
- urllib3=1.26.15=pyhd8ed1ab_0
- wcwidth=0.2.6=pyhd8ed1ab_0
- webencodings=0.5.1=py_1
- wheel=0.40.0=pyhd8ed1ab_0
- wrapt=1.15.0=py310h1fa729e_0
- xarray=2023.3.0=pyhd8ed1ab_0
- xerces-c=3.2.4=h55805fa_1
- xorg-kbproto=1.0.7=h7f98852_1002
- xorg-libice=1.0.10=h7f98852_0
- xorg-libsm=1.2.3=hd9c2040_1000
- xorg-libx11=1.8.4=h0b41bf4_0
- xorg-libxau=1.0.9=h7f98852_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xorg-libxext=1.3.4=h0b41bf4_2
- xorg-libxrender=0.9.10=h7f98852_1003
- xorg-renderproto=0.11.1=h7f98852_1002
- xorg-xextproto=7.3.0=h0b41bf4_1003
- xorg-xproto=7.0.31=h7f98852_1007
- xyzservices=2023.2.0=pyhd8ed1ab_0
- xz=5.2.6=h166bdaf_0
- zipp=3.15.0=pyhd8ed1ab_0
- zlib=1.2.13=h166bdaf_4
- zstd=1.5.2=h3eb15da_6
active environment : removeme
active env location : /home/panos/miniconda/envs/removeme
shell level : 1
user config file : /home/panos/.condarc
populated config files : /home/panos/.condarc
conda version : 23.1.0
conda-build version : 3.23.3
python version : 3.10.9.final.0
virtual packages : __archspec=1=x86_64
__cuda=12.1=0
__glibc=2.37=0
__linux=6.2.8=0
__unix=0=0
base environment : /home/panos/miniconda (writable)
conda av data dir : /home/panos/miniconda/etc/conda
conda av metadata url : None
channel URLs : https://conda.anaconda.org/gbrey/linux-64
https://conda.anaconda.org/gbrey/noarch
https://conda.anaconda.org/conda-forge/linux-64
https://conda.anaconda.org/conda-forge/noarch
https://repo.anaconda.com/pkgs/main/linux-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/r/linux-64
https://repo.anaconda.com/pkgs/r/noarch
package cache : /home/panos/miniconda/pkgs
/home/panos/.conda/pkgs
envs directories : /home/panos/miniconda/envs
/home/panos/.conda/envs
platform : linux-64
user-agent : conda/23.1.0 requests/2.28.1 CPython/3.10.9 Linux/6.2.8-arch1-1 arch/rolling glibc/2.37
UID:GID : 1000:1000
netrc file : None
offline mode : False
@SorooshMani-NOAA would you mind if I added you as a maintainer in searvey-feedstock?
No response
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