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covid
Python packagemodel.py
main CovidUKODE model classrdata.py
functions to import R .rds files with datapydata.py
functions for importing files not from R .rds filesutil.py
utility functions
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covid_ode.py
script that runs a test simulator -
mcmc.py
fits the model -
prediction.py
ingests a posterior frommcmc.py
, calculates predictions (saved in pred_2020-03-15.h5) file. -
ode_config.yaml
default YAML configuration file for Covid-19 model (used by the 3 files above) -
household_sim.py
experimental (and probably broken) code -
environment.yaml
conda description of the required environment. Create withconda create --file environment.yaml
claudiofronterre / covid19uk Goto Github PK
View Code? Open in Web Editor NEWThis project forked from chrism0dwk/covid19uk
License: MIT License