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  • šŸ‘‹ Hi, Iā€™m @ChrisCreevey
  • šŸ‘€ Iā€™m interested in microbial ecology and evolution
  • šŸ“« How to reach me: Twitter:@hairy_llama

Chris Creevey's Projects

alltreees icon alltreees

A simple piece of code that generates all possible unrooted trees in tree-space, given a certain number of taxa

catsequences icon catsequences

A tool for concatenating multiple fasta alignments for supermatrix phylogenetic analyses

clan_check icon clan_check

Check trees for compatibility with defined groupings in unrooted trees - "The incontestable clan test"

clann icon clann

Clann: constructing consensus trees and supertrees from multiple source trees

crann icon crann

Fast heuristic methods of detecting adaptive evolution in protein-coding genes.

machete icon machete

Machete: Automated Likelihood decay indices and Maximum likelihood phlyogeny construction with PAUP*

randomblast icon randomblast

A tool for identifying gene famililes from very large datasets.

rdp_to_json icon rdp_to_json

tools for parsing RDP taxonomy output in JSON format for visualisation

strip_parsinform icon strip_parsinform

An experimental tool to strip alignments by infomrativeness, conservation, etc..

treedist icon treedist

Rapid calculation of pathlength distances between taxa on phlyogenetic trees

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