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Name: Christopher Cole
Type: User
Company: @deepgenomics
Bio: Lead scientist at Deep Genomics interested in functional, statistical, and population genomics.
Twitter: _chriscole_
Location: Toronto
Blog: chrisbcole.me
Name: Christopher Cole
Type: User
Company: @deepgenomics
Bio: Lead scientist at Deep Genomics interested in functional, statistical, and population genomics.
Twitter: _chriscole_
Location: Toronto
Blog: chrisbcole.me
Swap allels to ancestral / derived in a VCF.
Solutions for the advent of code 2022
Solutions for the advent of code 2023
A goldi-based shiny app to identify allergens.
Cole et al 2021 analysis pipeline and result files.
Weighted latent dirichlet allocation for bulk ATAC-seq
Wrappers and convenience functions either not yet included in a package or for personal use.
Personal website.
cisTopic: Probabilistic modelling of cis-regulatory topics from single cell epigenomics data
Flask cookbook application automatically deployed to Github pages
Evaluation of Simultaneous Inference Methods for the Human Genome.
Working through Robert Nystrom's Crafting Interpreters
Deep learning prediction of cell-type specific RNA stability.
System configurations for Arch Linux, OSX, and CentOS 6.8
DPhil thesis completed at the University of Oxford
Talk given at the EGHOP summer journal club
A Discord bot for converting between resources in Epic RPG (another Discord bot).
Pre-processing of genomic intervals for deep learning.
Easily open the file used to generate an exported PDF from R / ggplot2.
R Package for Gene Ontology Label Discernment and Identification.
Simulate a mixed-population GWAS for use in training exercises.
A Snakemake pipeline for creating IMa3 input from a VCF file via the Popgen Pipeline Platform.
Automated imputation pipeline for arbitrary dataset and reference panels.
Command-line interface to the LanceOTron deep learning peak caller
LD Score Regression (LDSC)
Validation of Multiple Comparisons techniques for the human genome
An example of snakemake's reporting functionality.
PolyFun (POLYgenic FUNctionally-informed fine-mapping)
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.