Comments (1)
It seems like this is rooted in a couple different issues that arose between 3.8 -> 3.10
:
- An update in
setuptools>=38
that breaks support foruse_2to3
in project builds. A couple of the common single cell packages haven't updated their build tools to account for this yet (e.g.louvain
). https://setuptools.pypa.io/en/latest/history.html#v58-0-0 scikit-misc
seems to misspecify their build tools for the newest python versions, but I found we could drop the dependency.torch
is not yet supported inpython=3.10
I've added a note to the README
to encourage python=3.8
for users given the torch
issues. I'll revisit supporting newer python
versions when major dependencies add support.
Addressed in #18
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Related Issues (15)
- segmentation fault after training finished
- Human atlas not available in notebook? HOT 4
- domain_groupby argument missing HOT 3
- Add edge-case testing for "jackpot" cells
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- RuntimeError: NaN loss encountered in training HOT 2
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- Unable to run the model successfully. HOT 1
- No longer installs HOT 1
- scNym Will Not Install HOT 5
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- Multiple categories HOT 4
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