domain_groupby argument missing about scnym

[jacobkimmel]

@MariekeL Apologies for the trouble. This should be fixed now if you update your Github checkout to master or pip install --upgrade scnym. Double check that your final installed version now reads 0.3.1.

[jacobkimmel]

Hi @MariekeL, thanks for your interest! This looks like a bad PR on my end. It will be fixed by EOD and I'll tag you. Thanks for the heads up!

[jacobkimmel]

@MariekeL : For now, you can use multidomain training with the following edit to the model config file.

config_name = "no_new_identity" # or other valid config
config = scnym.api.CONFIGS[config_name]
config["domain_groupby"] = "your_domain_column"

scnym.api.scnym_api(
  adata=adata, groupby=groupby, out_path=out_path, config=config,
)