brianstock / mixsiargui Goto Github PK
View Code? Open in Web Editor NEWA graphical user interface (GUI) for MixSIAR, a framework for Bayesian mixing models in R
License: GNU General Public License v3.0
A graphical user interface (GUI) for MixSIAR, a framework for Bayesian mixing models in R
License: GNU General Public License v3.0
When running the code:
devtools::install_github("brianstock/MixSIARgui", dependencies=T) # installs MixSIAR as dependency
I have received this error:
Error: Failed to install 'MixSIARgui' from GitHub:
(converted from warning) installation of package โC:/Users/ellen/AppData/Local/Temp/RtmpOAJLoj/file485824d92117/MixSIARgui_1.0.0.tar.gzโ had non-zero exit status
My output of sessionInfo() is:
R version 3.6.3 (2020-02-29)
Platform: i386-w64-mingw32/i386 (32-bit)
Running under: Windows 10 x64 (build 18362)
Matrix products: default
Random number generation:
RNG: Mersenne-Twister
Normal: Inversion
Sample: Rounding
locale:
[1] LC_COLLATE=English_United Kingdom.1252
[2] LC_CTYPE=English_United Kingdom.1252
[3] LC_MONETARY=English_United Kingdom.1252
[4] LC_NUMERIC=C
[5] LC_TIME=English_United Kingdom.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods
[7] base
other attached packages:
[1] RGtk2_2.20.36
loaded via a namespace (and not attached):
[1] rstudioapi_0.11 magrittr_1.5 usethis_1.6.1
[4] devtools_2.3.0 pkgload_1.1.0 R6_2.4.1
[7] rlang_0.4.7 fansi_0.4.1 tools_3.6.3
[10] pkgbuild_1.1.0 sessioninfo_1.1.1 cli_2.0.2
[13] withr_2.2.0 ellipsis_0.3.1 remotes_2.1.1
[16] assertthat_0.2.1 digest_0.6.25 rprojroot_1.3-2
[19] crayon_1.3.4 processx_3.4.3 callr_3.4.3
[22] fs_1.4.2 ps_1.3.3 curl_4.3
[25] testthat_2.3.2 memoise_1.1.0 glue_1.4.1
[28] compiler_3.6.3 desc_1.2.0 backports_1.1.7
[31] prettyunits_1.1.1
The idea is to increase the subdivision of the installation steps so that users can follow along in the process and identify exactly which steps of the process are not working as intended. These steps are also expanded to include instructions on how to install depreciated / archival packages.
The GUI...
install.packages("MixSIAR", dependencies=TRUE)
install.packages(c("RGtk2", "devtools"))
install.packages("https://cran.r-project.org/src/contrib/Archive/gWidgets/gWidgets_0.0-54.tar.gz", repos=NULL, type="source")
RGtk2
. You will be prompted to install GTK+. Follow the automatic prompts and do not interrupt the GTK+ installation!:library(RGtk2)
library(RGtk2)
install.packages("cairoDevice", dependencies=TRUE) # is a dependency of gWidgetsRGtk2
install.packages("https://cran.r-project.org/src/contrib/Archive/gWidgetsRGtk2/gWidgetsRGtk2_0.0-83.tar.gz", repos=NULL, type="source")
devtools::install_github("brianstock/MixSIARgui", dependencies=TRUE)
There may be an error message about needing RTools 35. Don't worry. This error can be ignored if the next step works fine.
library(MixSIARgui)
mixsiar_gui()
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