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open-data-registry

A registry of publicly available datasets on AWS

packer-ubuntu12.04-cgroups

A packer template for building Ubuntu 12.04 with a modern kernel and ready for vagrant

pbsjavadrmaa

Java bindings for the PBS DRMAA interface.

pcluster-manager

Manage AWS ParallelCluster through an easy to use web interface

pscf

Polymer self-consistent field theory

puppet-aodh

OpenStack Aodh Puppet Module

puppet-keystone

OpenStack Keystone Puppet Module

puppet-neutron

OpenStack Neutron Puppet Module

puppet-nova

OpenStack Nova Puppet Module

puppet-openstack-integration

Collection of scripts and manifests for module testing

puppetlabs-openstack

Puppet Labs Reference and Testing Deployment Module for OpenStack (master tracks Mitaka)

quickstart-illumina-dragen

AWS Quick Start Team

rbf_hash_query

A Fixed-Grid Prototype for RBF Stencil Generation With Various Space Filling Curves

rbffd_gpu

Radial Basis Function Finite Differences on the GPU

rbffd_gpu_scripts

Scripts (mostly matlab post processing) for the rbffd_gpu and other projects.

rbffd_prototypes

Prototypes Written in Matlab and Mathematica for the RBFFD_GPU Project

relion

Image-processing software for cryo-electron microscopy

rtwo

a unified interface into multiple cloud providers.

service-workbench-on-aws

A platform that provides researchers with one-click access to collaborative workspace environments operating across teams, universities, and datasets while enabling university IT stakeholders to manage, monitor, and control spending, apply security best practices, and comply with corporate governance.

spack

A flexible package manager that supports multiple versions, configurations, platforms, and compilers.

sphere_grids

Grids on the unit sphere used as test cases for my dissertation

srj-vim-resources

vimrc etc. that I use

stereo_animator_blender2.49b

This iterates through all cameras in a scene, replaces each camera with a stereo camera rig and renders the left/right stereoscopic pair to disk. Developed for Blender 2.49b. Not sure if it is necessary for Blender 2.5+, but the code is here for reference.

tools-devteam

Contains a set of Galaxy Tools mostly written by the Galaxy Team.

tributary

rapid prototyping with d3.js

tso_cnv

Copy number variation detection for TruSightOne capture

tychus

underworld2

underworld2: A parallel, particle-in-cell, finite element code for Geodynamics.

viennacl

NOTE: this is outdated. Please follow this repo instead: https://github.com/viennacl/viennacl-dev . Fork of the ViennaCL Project from Sourceforge (upstream: git://viennacl.git.sourceforge.net/gitroot/viennacl/viennacl). Fork/Clone this easily within GitHub. I will attempt to keep master updated regularly from upstream. My own modifications will be in the multi-gpu branch.

viennacl-dev

Developer repository for ViennaCL. Visit http://viennacl.sourceforge.net/ if you are looking for the latest releases.