bollig Goto Github PK

atmosphere

Where cloud lives.

aws-cfn-templates

AWS CloudFormation Templates Samples

aws-deployment-guide

Seamlessly deploy cryoSPARC in the cloud using AWS CloudFormation and AWS ParallelCluster.

aws-genomics-workflows

Genomics Workflows on AWS

aws-parallelcluster

AWS ParallelCluster is an AWS supported Open Source cluster management tool to deploy and manage HPC clusters in the AWS cloud.

aws-parallelcluster-cost-allocation-tags

aws-parallelcluster-monitoring

Monitoring Dashboard for AWS ParallelCluster

chromogenic

The chromogenic cloud library can be used to create machine images from instances or existing images and make them portable across providers, as well as support for exporting to localized virtualization (i.e. Virtualbox/VMware).

clspmv_mic

A MIC-based implementation of the clSpMV code (http://www.eecs.berkeley.edu/~subrian/clSpMV.html). Includes many improvements like generalizations to templates.

cmakeutilities

A collection of CMake modules and examples I have sitting around.

cmaq

Code base for the U.S. EPA’s Community Multiscale Air Quality Model (CMAQ). For additional background on CMAQ please visit: www.epa.gov/CMAQ

cryoem-on-aws-parallel-cluster

This GitHub repository contains resources to deploy the solution described in the HPC Blog for CryoSparc on AWS ParallelCLuster

cuda-qt-framework

A simple framework for CUDA applications using Qt and CMake.

docker-cbioportal

A minimal standalone Docker container running the cBioPortal for Cancer Genomics (http://www.cbioportal.org/). Based on Centos.

dotfiles

Dotfiles to config my environment in various settings

e4s

E4S Spack environments and container recipes

eksctl

The official CLI for Amazon EKS

emr_notebooks_example

An example notebook for AWS EMR Notebooks. The example processes MovieLens data stored in an S3 bucket as an example.

gitlab-runners

Images used to run Gitlab pipelines in the cloud

glance

The Glance project provides services for discovering, registering, and retrieving virtual machine images. Glance has a RESTful API that allows querying of VM image metadata as well as retrieval of the actual image.

grafana-gnocchi-datasource

Grafana (3.x) Gnocchi datasource

homebrew

The missing package manager for OS X.

homebrew-science

Scientific formulae for the Homebrew package manager

horizon

Horizon is a Django-based project aimed at providing a complete OpenStack Dashboard along with an extensible framework for building new dashboards from reusable components.

karen

My dissertation

lambda-ecs-worker-pattern

This example code illustrates how to extend AWS Lambda functionality using Amazon SQS and the Amazon EC2 Container Service (ECS).

landing-zone-accelerator-on-aws

Deploy a multi-account cloud foundation to support highly-regulated workloads and complex compliance requirements.

latextemplates

Some of my personal templates for creating latex documents. Includes my own style for beamer slides.

matlab-on-aws

Stand up a MATLAB desktop with Remote Desktop access using AWS CloudFormation

mudicom

A python package that validates, reads, and extracts images from a DICOM file