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imputation-nf

Imputation pipeline

imputation_accuracy_calculator

introduction-to-rad

k8s_test_nf

k9-wgs-pipeline

Nextflow pipeline for standardised variant calls on canine genomes

maf

WGS Analysis of Mycobacterium Africanum ( MAF )

mdr_and_xdr_latin_america

mgi-ncov19-snakemake

miru-profiler

mlwse

Multi-Label Classification with Weighted Classifier Selection and Stacked Ensemble

modules

Nextflow DSL2 implementations of pipeline modules for bacterial (nanopore) genomics :lizard:

mozambique_genomes

mtb_mono_inh_nf

mtb_resistance_sniffer_docker

mtbseq-nf

MTBSeq made simple and easy using Nextflow.

multi-projects

nam-genomes

Detailed bioinformatics scripts and methods used in the NAM genome paper.

ncbi_to_dropbox

ncov2019-artic-nf

A Nextflow pipeline for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), with a focus on ncov2019

nextflow

develope bionformatics pipeline using NextFlow and its Unit testing

nextflow-spark

nextflow_lab

nf-core-singlegenometese

nf-gwas

A nextflow pipeline to perform genome-wide association studies using regenie.

nf-gwas-pipeline

A Nextflow Genome-Wide Association Study (GWAS) Pipeline

ngs-analysis-from-tb-sputum

A pipeline to remove contaminant NGS reads from TB-sputum samples

nixos-configuration

Personal NixOs configuration

pipeliner

A flexible Nextflow-based framework for the definition of sequencing data processing pipelines

pipelines-nextflow

A set of workflows written in Nextflow for Genome Annotation.

ramdaq_bcl2fastq