bhklab Goto Github PK

consensuspgxpaper

coregx

Shared code for both PharmacoGx and RadioGx

cream

CREAM (Clustering of Functional Regions Analysis Method) is a new method for identification of clusters of functional regions (COREs) within chromosomes.

crosstalknet

A web resource to analyze bi-partite and non-bipartite biological networks.

cytoscanhdvshaloplextargetseq

Analysis assessing how well a Haloplex Targeted Sequencing panel of ~800 genes recapitulates results from a larger Cytoscan HD whole genom SNP array.

da-detection

dataingestion

A repo to hold the version controlled data injestion pipelines for various BHKLab web applications.

deepcinet

demo-githubprojectmanagement

A demo and some documentation for using GitHub as our project management tool.

dentalartifactmodel

Template repository as base to create a new model that can be plugged into modelhub.ai

dna11161

dnf

Drug Network Fusion: Data integration from multiple drug information layers

dnfapi

dockerfiles-chris

drugnet

drugnetworkfusion

Web resource for inferring new hypotheses about the mode of action of chemical compounds prior to clinical use

drugtissue

dtp_her2_bc

eacon

Easy Copy Number !

eacon_cnv_pipeline

epistroma

Source code for the EpiStroma project

epistromaimmune

fastci

A nlogn implementation of the Concordance Index

fda_mdacc

FDA study of inter‐laboratory and inter‐platform reproducibility of microarray‐based gene expression measurements

fluvastatin_terbinafine

gene_expression_bimodality

genefu

R package providing various functions relevant for gene expression analysis with emphasis on breast cancer.

genefusiondrug

Robust detection of gene fusions and their association with drug response in cancer cell lines

graphcomm

gsva

Gene set variation analysis