bgruening / docker-galaxy-ngs-preprocessing Goto Github PK

Maybe it can be of interest to add MultiQC tool ?

tool_panel_section_id: quality_control
tool_panel_section_label: Quality Control
tool_shed_url: toolshed.g2.bx.psu.edu

• install_repository_dependencies: true
  install_resolver_dependencies: true
  install_tool_dependencies: true
  name: stacks_clonefilter
  owner: iuc
  revisions:
  • a0a51078cb61

We should link to the readme of the main Docker image and not repeat text, this will soon be outdated or very hard to update. License, contributors and so on should stay, but for all docs just point our users to

https://github.com/bgruening/docker-galaxy-stable

There is some error with access to js libraries in the newest version:

$  docker run -i -t -p 8081:80 bgruening/galaxy-ngs-preprocessing

while running the older version works without issue

$ docker run -i -t -p 8080:80 bgruening/galaxy-ngs-preprocessing:18.01 # this works

Should we add HiSAT and TopHat2 as well? Star?