cwl-runner --debug --cachedir pwd
/cwl-cache ~/Winterfell_SMC_RNA_DREAM2016/RSEM/cwl/workflow/smcIsoform-rsem-workflow.cwl pwd
/rsem_inputs.json
cwltool --pack Winterfell_SMC_RNA_DREAM2016/RSEM/cwl/workflow/smcIsoform-rsem-workflow.cwl > smcIsoform.Winterfell.packed.cwl