andreasprlic Goto Github PK
Name: Andreas Prlic
Type: User
Company: Natera
Bio: Working on genome interpretation.
Location: San Diego
Name: Andreas Prlic
Type: User
Company: Natera
Bio: Working on genome interpretation.
Location: San Diego
[in development] Proof-of-Concept variation translation, validation, and registration service
non-redundant, compressed, journalled, file-based storage for biological sequences
BioJava is an open-source project dedicated to providing a Java framework for processing biological data. It provides analytical and statistical routines, parsers for common file formats and allows the manipulation of sequences and 3D structures. The goal of the biojava project is to facilitate rapid application development for bioinformatics.
HTML/JS based user interfaces for BioJava
Legacy BioJava 1 Code
:collision: Algorithms that are built around BioJava and run on Apache Spark
A tutorial for BioJava 3
bioutils provides some common tools and lookup tables used primarly by the hgvs and uta packages
Interactive web-based genome browser.
simplified searching, fetching, and parsing records from NCBI using their E-utilities interface
Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`
A javascript library to generate SVG based ideograms of chromosomes showing cytogenetic bands
A repository to host the competition for a new BioJava log
Convert a MediaWiki export XML file into MarkDown as a series of git commits
The java implementation of the MMTF API, decoder and encoder.
A module to hold Spark examples and functions for the MMTF project
WebGL protein viewer
Find proteins by the distances between their atoms.
The Protein Feature View - a SVG library for visualising protein annotations
WebGL protein viewer
Methods for fast structural database searches and clustering
PDB Amino Acid Sequence Viewer
Biojava based RCSB Viewers
An archive of data for the legacy Sisyphus project
supplemental material for a manuscript that is under review
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.