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acer_light

Effect of light intensity on Acer growth rate

acer_nh4_disease

anampc.github.io

anampc_0.github.io

cbass_yii

co-factors_armandes

co-factors_bw

co-factors_ipam

co-factors_lesions

co-factors_nutrients

co2

coral_antibiotics_physiology

d_proportion

Evolution of D1a proportion in Ssid colonies over time

dge_workshop

dhw_uva

etp_reef_resilience

This repository contains data and analysis scripts for the manuscript: Coral reef resilience to thermal stress in the Eastern Tropical Pacific

flk_2021

globalbar

data and analysis for global bar paper

imaginpam-import

Consilidates YII data from multiple .csv data files and adds ID information about the sample in each IPAM .csv file/AOI

initialvschange

labelmaker

Printable QR labels for samples

metodos_cobertura

mfeprimer-3.0

PCR Primer Quality Control

ncrmp_2022_fgb

ncrmp_2022_stx

ncrmp_2023_pr

ncrmp_2023_stt_stj

nextera_dada2

A wrapper around the process needed to process MiSeq reads with Dada2 when the libraries have been made with Nextera adapters

nutrients

Effects of nutrients in SH and YII

nutrientsheat_caribbean

We examined the effects of pre-exposure to elevated nutrients (NH4 and NH4 + PO4 for >2 months at 26 °C), followed by heat stress (31.5 °C for 3-weeks) on three Caribbean corals: A. cervicornis, O. faveolata, and S. siderea. We aimed to compare the effects of these combined stressors on coral survivorship, and associated algal symbiont communities (community composition, abundance, and function).