Print basic stats from sequence files.
usage: seqstats [-h] [-f {fasta,clustal,embl,genbank,imgt,phd,pir,tab}] [-v] seqfile [seqfile ...]
This is a Python script, so, you can just run the uniqseq.py file or put a symbolic link in any directory of your PATH (e.g. /usr/local/bin). The second option is recommend.
- Python3
- Biopython
- argparse
- statistics
It runs in Linux, probably in Mac OS too, but not tested.
seqstats seq.fasta
seqstats seq1.pir seq2.pir -f pir