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DLC2Action is an action segmentation package that makes running and tracking of machine learning experiments easy.

Home Page: https://amathislab.github.io/DLC2action/html_docs/dlc2action.html

License: Other

Python 5.48% HTML 94.52% Shell 0.01%
action-recognition action-segmentation behavioral-analysis deeplabcut dlc2action

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dlc2action's Issues

UnicodeDecodeError: 'utf-8' codec can't decode byte 0x80 in position 0: invalid start byte

I did

from dlc2action.project import Project
project = Project(
    'dlc_proj_2',
    data_type='dlc_track',
    annotation_type='csv',
    data_path='data_path',
    annotation_path='annotation_path',
)
project.update_parameters(
    {
        "data": {
            "data_suffix": ".pickle", # there's currently only 1 file in the folder
            "canvas_shape": [1186, 1054], 
            "annotation_suffix": ".csv", 
            "fps": 1 
        },
        "general": {
            "exclusive": True, 
        },
    }
)
project.run_default_hyperparameter_search('def_search_1st')

and got:

`[I 2024-03-25 12:06:09,901] A new study created in memory with name: no-name-08bd6156-20e9-474f-acbf-9da343bb7576
[W 2024-03-25 12:06:11,969] Trial 0 failed with parameters: {'losses/ms_tcn/alpha': 6.670201845207353e-05, 'losses/ms_tcn/focal': True, 'training/temporal_subsampling_size': 0.8767323445118085, 'model/num_f_maps': 70, 'general/len_segment': 1024} because of the following error: UnicodeDecodeError('utf-8', b'\x80\x05\x95\x1b\x02\x01\x00\x00\x00\x00\x00}...

on a Window PC running in a dedicated conda env with cuda 11 enabled GPU.
Happy to supply the files if it could help reproduce the issue. Thanks!

Example data link doesn't work

It can still be downloaded from DLCAnalzyer github, but the way it's stored is different as it's one file of concatenated data

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