All structural analysis codes are given for Structural Analysis of Mammalian Protein Phosphorylation at a Proteome Level. Each process is separated into different python files to decrease the complexity of files.
Processes include matching pre-editing of phosphoproteomics data, pre-editing of structural data, matching of phospho-site with respective structural information, NMR and multiple X-ray structure analysis, random forest classifier for functionality detection of phospho-sites, and statistical analysis of results.
Needed files can be found in following drive link: https://drive.google.com/drive/folders/1ViQBg7yxzOA3YbLZuyMkM-oMzi_NLp_A?usp=sharing