abhilampard / physionet-csv-conversion

Code to access the ECG data from Physionet using Python.

Physionet-CSV-Conversion

Code to access the ECG data from Physionet using Python (Access ".dat" file).

Datasets tested on:

• AFib Databases(CinC 2001 and 2004)
• Apnea Database
• MIT-BIH-Arrythmia
• PTBDB

physionet-csv-conversion's Issues

glob not defined

FileNotFoundError: [Errno 2] No such file or directory: '/home/mahmood/apnea-ecg/02r.hea'

1 c02r
Traceback (most recent call last):
File "script.py", line 20, in
record = wfdb.rdsamp(recordname_new) # rdsamp() returns the signal as a numpy array
File "/home/mahmood/.local/lib/python3.6/site-packages/wfdb/io/record.py", line 1394, in rdsamp
warn_empty=warn_empty)
File "/home/mahmood/.local/lib/python3.6/site-packages/wfdb/io/record.py", line 1154, in rdrecord
record = rdheader(record_name, pb_dir=pb_dir, rd_segments=False)
File "/home/mahmood/.local/lib/python3.6/site-packages/wfdb/io/record.py", line 991, in rdheader
dir_name, pb_dir)
File "/home/mahmood/.local/lib/python3.6/site-packages/wfdb/io/_header.py", line 705, in _read_header_lines
with open(os.path.join(dir_name, file_name), 'r') as fp:
FileNotFoundError: [Errno 2] No such file or directory: '/home/mahmood/apnea-ecg/02r.hea'