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100-days-of-python

🐍 The Complete Python Pro Bootcamp for 2021

30-days-of-python

30 days of Python programming challenge is a step-by-step guide to learn the Python programming language in 30 days. This challenge may take more than100 days, follow your own pace. These videos may help too: https://www.youtube.com/channel/UC7PNRuno1rzYPb1xLa4yktw

core-phylogenomics-tutorial

A set of tutorials for the core phylogenomics pipeline.

coronavirus

coursera_capstone

data_analysis

Random csv flat file analysis

datasciencecoursera

Assignment_1

datasharing

The Leek group guide to data sharing

dsbook

Repository for data science book

environments_for_tsd

This repo contains the commands used to create different Conda environments for psd

gnuplot

Unofficial mirror of gnuplot's git repository. Please don't open pull requests here, go to https://sourceforge.net/p/gnuplot/gnuplot-main/merge-requests/ instead.

h3avarcall

H3A variant calling pipeline

heliothine_reseq_paper

Coding for recreating some of the analyses from the heliothine reseq work

hrc-release1

Setup for genotype likelihood calculation for the Haplotype Reference Consortium Release 1

kajoli

I have no idea what I am going to do!!!!

labs

Rmd source files for the HarvardX series PH525x

liftover_plink_beds

Converting UK Biobank genome-wide genotyping data from one reference build to another

machine-learning-exercise

Python implementation of the programming assignment from Machine Learning class on Coursera, which is originally implemented in Matlab/Octave.

machine-learning-with-r-third-edition

Machine-Learning-with-R-Third-Edition, published by Packt

mammalian_snps

Here are some figures about snps in mamallians

modsimpy

Text and supporting code for Modeling and Simulation in Python

omic_box_1

phylogenomics

population_genomics

Here are some igures about effective population size

programmingassignment2

Repository for Programming Assignment 2 for R Programming on Coursera

proposal_degi

proteome_size_analysis

Here are some figures about relationships among proteome size and other pathways

python-programming-exercises

100+ Python challenging programming exercises

results

Scripts and figures of orthogroups results

rnaseq