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apparent

A simple and flexible R package for accurate SNP-based parentage analysis in the absence of guiding information

asremlplus

asremlPlus is an R package that augments the use of 'ASReml-R' and 'ASReml4-R' in fitting mixed models

bioinformatics-one-liners

Bioinformatics one liners from Ming Tang

book3_elements-of-mathematics

Book_3_《数学要素》 | 鸢尾花书：从加减乘除到机器学习；上架；欢迎继续纠错，纠错多的同学还会有赠书！

circlator

A tool to circularize genome assemblies

dnds

Calculate the dn/ds (also pn and ps) value of cds

fastaselect

Extract sequences from a large fasta file

genome-annotation-pipeline

Genome annotation

genomics_general

General tools for genomic analyses.

machine-learning

:zap:机器学习实战（Python3）：kNN、决策树、贝叶斯、逻辑回归、SVM、线性回归、树回归

machine-learning-learning-notes

周志华《机器学习》又称西瓜书是一本较为全面的书籍，书中详细介绍了机器学习领域不同类型的算法(例如：监督学习、无监督学习、半监督学习、强化学习、集成降维、特征选择等)，记录了本人在学习过程中的理解思路与扩展知识点，希望对新人阅读西瓜书有所帮助！

melon_concepts

西瓜书概念整理

pyfasta

fast, memory-efficient, pythonic (and command-line) access to fasta sequence files

snpgenie

Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data

teleost_genomes_immune

tutorials

Tutorials on phylogenetic and phylogenomic inference

vcf-ref-fasta

vcf2fasta

Convert a vcf file to a fasta file

vcf2phylip

Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis

vcf_uniq_variant

Find the population specific variants from VCF file.

vgp-assembly

VGP repository for the genome assembly working group

zhutao1009

Config files for my GitHub profile.