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zhoujingru1997's Projects

cobrapy icon cobrapy

COBRApy is a package for constraint-based modeling of biological networks

cobratoolbox icon cobratoolbox

The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:

ecmodels icon ecmodels

A container for all enzyme constrained models created by GECKO.

etfl icon etfl

ETFL: A formulation for flux balance models accounting for expression, thermodynamics, and resource allocation constraints

gecko icon gecko

Toolbox for including enzyme constraints on a genome-scale model.

mattfa icon mattfa

A Matlab implementation of Thermodynamics-based Flux Analysis

pytfa icon pytfa

A Python 3 implementation of Thermodynamics-based Flux Analysis

raven icon raven

The RAVEN Toolbox for genome scale model reconstruction, curation and analysis.

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