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2020-advanced_single_cell_rna_seq

Building on material from Introduction to Single Cell RNA-Seq, this workshop aims to cover advanced topics, including TCR and trajectory analysis. Instruction in introductory analysis will not be provided.

ailearning

AiLearning: 机器学习 - MachineLearning - ML、深度学习 - DeepLearning - DL、自然语言处理 NLP

algorithms

Bug-tracking for Jeff's algorithms book, notes, etc.

amplify

Attentive deep learning model for antimicrobial peptide prediction

bioinformatics123

biren

blog

Share my knowledge, share my life.

bsbolt

BiSulfite Bolt - A Bisulfite Sequencing Alignment and Processing Tool

cfdnapipe

cfDNApipe: A comprehensive quality control and analysis pipeline for cell-free DNA high-throughput sequencing data

chatglm-6b

ChatGLM-6B：开源双语对话语言模型 | An Open Bilingual Dialogue Language Model

chloroplast_assembly_protocol

A set of scripts for the assembly of chloroplast genomes out of whole-genome sequencing reads

chm13

The complete sequence of a human genome

circle-map

A method for circular DNA detection based on probabilistic mapping of ultrashort reads

circle_finder

Micro DNA identification

clipsv

ClipSV: detecting structural variations by spliced alignment and local assembly

data8-textbook-zh

:book: [译] UCB DATA8 计算与推断思维

deeplearning-500-questions

深度学习500问，以问答形式对常用的概率知识、线性代数、机器学习、深度学习、计算机视觉等热点问题进行阐述，以帮助自己及有需要的读者。 全书分为18个章节，50余万字。由于水平有限，书中不妥之处恳请广大读者批评指正。 未完待续............ 如有意合作，联系[email protected] 版权所有，违权必究 Tan 2018.06

deeplearning_ai_books

deeplearning.ai（吴恩达老师的深度学习课程笔记及资源）

deepmod

DeepMod: a deep-learning tool for genomic-scale, strand-sensitive and single-nucleotide based detection of DNA modifications

deepsea

DeepSEA in TensorFlow

deepsvr

dismir

ecc_finder

a tool to detect eccDNA using Illumina and ONT sequencing

fucking-algorithm

手把手撕LeetCode题目，扒各种算法套路的裤子。English version supported! Crack LeetCode, not only how, but also why.

genomics_general

General tools for genomic analyses.

gpt_academic

为ChatGPT/GLM提供图形交互界面，特别优化论文阅读润色体验，模块化设计支持自定义快捷按钮&函数插件，支持代码块表格显示，Tex公式双显示，支持Python和C++等项目剖析&自译解功能，PDF/LaTex论文翻译&总结功能，支持并行问询多种LLM模型，支持清华chatglm等本地模型。兼容复旦MOSS, llama, rwkv, 盘古, newbing, claude等

hello-world

just for test

hic_data

A (continuously updated) collection of references to Hi-C data. Predominantly human/mouse Hi-C data, with replicates.

int-hmm

learning

生物信息基础学习