Name: Yuka Takemon, PhD
Type: User
Company: Michael Smith Laboratories
Bio: Research associate @bcgsc @ubc, frequent instructor and lesson maintainer @carpentries @rstudio, and organizer @R-Ladies-Vancouver
Twitter: YukaTakemon
Location: Vancouver, BC, Canada
Blog: https://www.yukatakemon.com/
Yuka Takemon, PhD's Projects
Scripts used for the 1415 Col4a5xDO project
https://ytakemon.github.io/2019-10-22-R-BCCRC
2020 R for reproducible research @ BC Cancer
Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens
Predicts off-target propensity of CRISPR guide sequences
The Leek group guide to data sharing
QTL mapping for Diversity Outbred mice (and other multi-founder advanced intercrosses)
Intro to R and RStudio for Genomics
The Leek group guide to genomics papers
R/shiny app to estimate glomerular filtration rate
GRETTA (Genetic inteRaction and EssenTiality neTwork mApper): An R package for mapping genetic interaction and essentiality networks
Repo containing helper scripts for various applications
Materials for BCCHRI R Workshop
Supporting material for upcoming manuscript on KMT2D in silico genetic networks
Quantitative Trait Mapping Lesson
Course contents for Master the Tidyverse
Solutions for exercises in Master the Tidyverse
D3 JavaScript Network Graphs from R
Programming with Python
Introduction to R for non-programmers using gapminder data.
Software Carpentry introduction to R for novices using inflammation data.
Code associated with paper - **Genome-Wide Transcriptional Regulation Mediated By Biochemically Distinct Forms of SWI/SNF**