列指向bit表現でのbug fix about chromloopc

[yk-tanigawa]

- segmentation fault in writing to file

Job 215414 (kmerPairBoost.sh) Complete
 User             = *
 Queue            = *
 Host             = *
 Start Time       = 12/19/2015 00:40:06
 End Time         = 12/19/2015 01:51:06
 User Time        = 01:10:50
 System Time      = 00:00:07
 Wallclock Time   = 01:11:00
 CPU              = 01:10:58
 Max vmem         = 13.924G
 Exit Status      = 139

[yk-tanigawa]

memory freeにbug があることがわかった。

[yk-tanigawa]

bug fix をしてjob 217106に投げた

[yk-tanigawa]

• k= 4では遅いのでjob 217451に変更
• bug fixed
• 出力結果はbit modeでも同じ

$ diff ~/data/ChromLoopC/chr21.m10000.M100000.KR.KR.dat.k3.t8.578508.T10.bit.stamps ~/data/ChromLoopC/chr21.m10000.M100000.KR.KR.dat.k3.t8.578508.T10.stamps