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Cheng Yang's Projects

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An open-source framework for self-supervised recommender systems.

adafuse icon adafuse

The official code of ’AdaFuse: Adaptive Medical Image Fusion Based on Spatial-Frequential Cross Attention‘.

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An Ensemble Approach for CircRNA-Disease association prediction based on Autoencoder and Deep Neural Network

annotated_deep_learning_paper_implementations icon annotated_deep_learning_paper_implementations

🧑‍🏫 50! Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, ...), gans(cyclegan, stylegan2, ...), 🎮 reinforcement learning (ppo, dqn), capsnet, distillation, ... 🧠

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Node-Wise Adaptive Aggregation in GNNs for Recommendation (WWW23)

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bilinear graph neural network

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Code Repo for EMNLP'23 paper "Bipartite Graph Pre-training for Unsupervised Extractive Summarization with Graph Convolutional Auto-Encoders"

cdhgnn icon cdhgnn

prioritizing disease-related circRNAs with heterogeneous graph neural networks and attention mechanism

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Communicative Subgraph Representation Learning for Multi-Relational Inductive Drug-Gene Interaction Prediction

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Source code for our paper "Improving Attention Mechanism in Graph Neural Networks via Cardinality Preservation" (IJCAI 2020)

disease-mesh-similarity icon disease-mesh-similarity

For each disease, a directed acyclic graph (DAG) is constructed based on hierarchical descriptors, in which nodes represent disease MeSH descriptors (or disease terms) and edges represent the relationship between the current node and its ancestors. Then compare the DAG Similarity.

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DNN-DTIs: improved drug-target interactions prediction using XGBoost feature selection and deep neural network

drhgcn icon drhgcn

Drug repositioning based on the heterogeneous information fusion graph convolutional network

drugban icon drugban

Interpretable bilinear attention network with domain adaptation improves drug-target prediction.

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