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academicpages.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

algorithms

Minimal examples of data structures and algorithms in Python

allanlab

Allan Lab website

anndata

Annotated data.

awesome-python

A curated list of awesome Python frameworks, libraries, software and resources

awesome-streamlit

The purpose of this project is to share knowledge on how awesome Streamlit is and can be

blog

browsertracks

chm13

The complete sequence of a human genome

cloops

Accurate and flexible loops calling tool for 3D genomic data.

cloops2

Enhanced and elegant flexible peak/loop/domain -calling and analysis tool for 1D/3D genomic data.

cloops2_supp

cLoops2 manuscript supplemental files

cloops_supplementarydata

collected_networks

d2l-en

Interactive deep learning book with multi-framework code, math, and discussions. Adopted at 500 universities from 70 countries including Stanford, MIT, Harvard, and Cambridge.

ddia

《Designing Data-Intensive Application》DDIA中文翻译

deep-learning-book

《Deep Learning》《深度学习》 by Ian Goodfellow, Yoshua Bengio and Aaron Courville

genome

Python library and scripts for retrieval and storage of genomics data in HDF5 format

github-clone-count-badge

GitHub clone count badge using shields.io

hi-trac_active_subtads_supplemental

igv-webapp

IGV Web App

liger

R package for integrating and analyzing multiple single-cell datasets

loguru

Python logging made (stupidly) simple

machine_learning_from_scratch

manta

Structural variant and indel caller for mapped sequencing data

mednlp

My trail project for natural language processing both in English & Chinese

megadepth

BigWig and BAM utilities

neuroarms

my code house for some deep learning problems

numpy-ml

Machine learning, in numpy

paperscraper

A web scraping tool to systematically extract the text of scientific papers and corresponding metadata from university accessible journals.