yananzh Goto Github PK

ads1-notebooks

Copies of notebooks used in the practical sessions for Algorithms for DNA Sequencing

algorithms-for-dna-sequencing

Coursera MOOC Algorithms for DNA Sequencing by Ben Langmead, PhD, Jacob Pritt

amr

amr_finder

appliedgenomeresearch

course about NGS data processing: genomics and transcriptomics

ariba

Antimicrobial Resistance Identification By Assembly

awesome-bioinformatics

A curated list of awesome Bioinformatics libraries and software.

bactopia

A flexible pipeline for complete analysis of bacterial genomes

bcb546_spring2023

Materials for EEOB/BCB546: Bioinformatics data skills

bds-files

Supplementary files for my book, "Bioinformatics Data Skills"

bioinformatics

An Introductory Undergraduate course in Bioinformatics

bioinformatics-1

:microscope: Path to a free self-taught education in Bioinformatics!

bioinformatics-with-python-cookbook-second-edition

Bioinformatics with Python Cookbook Second Edition, published by Packt

cafe5

Version 5 of the CAFE phylogenetics software

cheatsheets

RStudio Cheat Sheets

checkm

Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes

complete-python-3-bootcamp

Course Files for Complete Python 3 Bootcamp Course on Udemy

courses

Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

cs-video-courses

List of Computer Science courses with video lectures.

cyverese_snp_calling_webinar

data-science-at-the-command-line

Data Science at the Command Line

dev-sidecar

开发者边车，github打不开，github加速，git clone加速，git release下载加速，stackoverflow加速

diamond

Accelerated BLAST compatible local sequence aligner.

dot

Dot: An interactive dot plot viewer for comparative genomics

dotplotly

Generate an interactive dot plot from mummer or minimap alignments

easyfig

Development version of Easyfig

elearningcollection

A collection of random and not so random online learning materials for biology, computation, and bioinformatics

flye

De novo assembler for single molecule sequencing reads using repeat graphs

genomegamap

Within-species genome-wide dN/dS estimation from very many genomes

genomic-data-science

Genomic data science specialization

genstats

Statistics course for JHU Genomic Data Science Sequence