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airflow

Airflow is a system to programmatically author, schedule and monitor data pipelines.

appliedgenomics2018

Materials for Spring 2018 Applied Genomics Course

avocado

A Variant Caller, Distributed. Apache 2 licensed.

awesome-quant

A curated list of insanely awesome libraries, packages and resources for Quants (Quantitative Finance)

butler

Butler is a framework for running scientific workflows on public and academic clouds.

butler_denbi

Butler configurations for de.NBI clouds.

butler_perf_analysis

caltech-ml

deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

docker-freebayes

eosc_pilot

Butler configurations for the EOSC Pilot project.

finmarketpy

Python library for backtesting trading strategies & analyzing financial markets (formerly pythalesians)

flexget

The official FlexGet repository

flickr_to_google_photos_migration

A tool for migrating your photo library from Flickr to Google Photos

gatk

GATK4 development

gatk-protected

GATK4 development of the license-protected part of the toolkit

genomicsltd

gtupload-centos-binary

hacking-sandbox

hadoop-formula

html2biblatex

Easily cite webpages in your LaTeX project! – html2biblatex is a JavaScript-"plugin" for exporting web pages to BibLaTeX.

ib_insync

Python sync/async framework for Interactive Brokers API

ib_market_capture

influxdb-formula

Installs and configures the InfluxDB timeseries database

logstash-patterns-core

marketmove

Calculate historial market moves

mmds

my-sandbox

Bindle is a provisioning tool.

na12878

Data and analysis for NA12878 genome on nanopore

nucleus

Python and C++ code for reading and writing genomics data.