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Chang Y's Projects

seclists icon seclists

SecLists is the security tester's companion. It's a collection of multiple types of lists used during security assessments, collected in one place. List types include usernames, passwords, URLs, sensitive data patterns, fuzzing payloads, web shells, and many more.

seqtools icon seqtools

Some simple python scripts to help you work with biological sequence data (DNA, proteins, etc) I'll add more as I create them (or find them on my hard drive)

shortstack icon shortstack

ShortStack: Comprehensive annotation and quantification of small RNA genes

sloth icon sloth

Single-cell Lineage on Targeted Hypermutation

slurm icon slurm

Cookiecutter for snakemake slurm profile

snakemake icon snakemake

This is the development home of the workflow management system Snakemake. For general information, see

spyre icon spyre

a web application framework for python

ssqr icon ssqr

Generate and Share ss Configure File by QR Code

ssw icon ssw

Python interface for SIMD Smith-Waterman Library

tmux-powerline icon tmux-powerline

Statusbar configuration for tmux that looks like vim-powerline and consist of dynamic segments.

treeio icon treeio

🌲 A pure python parser for tree data format IO

umi icon umi

Unique molecular identifiers (UMI) consolidation...

umi-tools icon umi-tools

Tools for handling Unique Molecular Identifiers in NGS data sets

varcode icon varcode

Library for manipulating genomic variants and predicting their effects

variant icon variant

python utils for genomic variant (WIP)

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