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wenyi's Projects

cnn-svm-classifier icon cnn-svm-classifier

Using Tensorflow and a Support Vector Machine to Create an Image Classifications Engine

deep-histopath icon deep-histopath

A deep learning approach to predicting breast tumor proliferation scores for the TUPAC16 challenge

deepslide icon deepslide

Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for classification of high resolution whole-slide images, often microscopy or histopathology images.

msifromhe icon msifromhe

predict microsatellite status from hematoxylin-eosin histology of gastrointestinal cancer

nuclei-segmentation icon nuclei-segmentation

This repository contains an implementation of a deep learning Mask R-CNN algorithm for nuclei segmentation from whole slide images of tissue sections using data from our MoNuSeg Challenge.

tcga_tmb_prediction icon tcga_tmb_prediction

using transfer learning to predict tumor mutational burden from whole slide images for bladder and lung cancer patients

tensorflow icon tensorflow

An Open Source Machine Learning Framework for Everyone

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