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Brian Weitzner's Projects

dotfiles icon dotfiles

Configuration files the way we like 'em

hbnetgen_example icon hbnetgen_example

This repository contains the necessary scripts and commands to recapitulate generating pre-organized hydrogen bonding networks, cluster and match them into protein scaffolds.

nglview icon nglview

IPython widget to interactively view molecular structures and trajectories

oligooverlapopt icon oligooverlapopt

Alternative version of script for overlap optimization from "Multiplex pairwise assembly of array-derived DNA oligonucleotides"

params_file icon params_file

A python module for generating params files for Rosetta

rif icon rif

Rotamer Interaction Field Python Libraries for Computational Protein Design

rifdock icon rifdock

Rifdock Library for Conformational Search

rosettaanalysis icon rosettaanalysis

An R package for performing common analyses from Rosetta simulations

tao-of-tmux icon tao-of-tmux

Spin-off book for tmuxp's documentation of "The Tao of Tmux"

trrosetta2 icon trrosetta2

Repository for publicly available deep learning models developed in Rosetta community

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