weipingofficial Goto Github PK

atac-pipe

Analysis pipeline for ATAC-seq Data

atac-seq-pipeline

ENCODE ATAC-seq pipeline

atacseq

Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)

biobabble

公众号：biobabble

bioinformatics123

in-depth-ngs-data-analysis-course

Materials for 12-day course on analyzing RNA-Seq, ChIP-Seq and variant calling data.

juicebox

Visualization and analysis software for Hi-C data -

machine-learning-learning-notes

周志华《机器学习》又称西瓜书是一本较为全面的书籍，书中详细介绍了机器学习领域不同类型的算法(例如：监督学习、无监督学习、半监督学习、强化学习、集成降维、特征选择等)，记录了本人在学习过程中的理解思路与扩展知识点，希望对新人阅读西瓜书有所帮助！

my-r

a small collection for my R scripts

ngs-pipeline

By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline

rnaseq_tutorial

Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.

seqflow

My pipeline and code collections for NGS data analysis, such as RNA-seq, ChIP-seq, MNase-seq, Hi-C, Trac-looping and etc, mainly keep the analysis within Python.

single-cell-tutorial

Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"