wangdi2016 Goto Github PK

2023-04-07-rnaseq

ace-2021

African Centers of Excellence (ACE) Training for 2021

admixture_in_africa

analysis and plotting code for "Admixture into and within Africa" by George Busby et al 2016 (eLife)

adv-r

Advanced R programming: a book

advntr

A tool for genotyping Variable Number Tandem Repeats (VNTR) from sequence data

agc

Assembled Genomes Compressor

aime-2023-paper

Scoring genesets using ssGSEA and log-rank test

aims_kenya

aips

Absolute Inference of Patient Signatures

alfred

BAM Statistics, Feature Counting and Annotation

algorithm_interview_notes-chinese

2018/2019/校招/春招/秋招/算法/机器学习(Machine Learning)/深度学习(Deep Learning)/自然语言处理(NLP)/C/C++/Python/面试笔记

aliview

Software for aligning viewing and editing dna/aminoacid sequences, intuitive, fast and lightweight. Download and website:

all2vcf

Toolkit to convert the output of common variant calling programs to VCF

allelefrequencies

📂 HLA allele frequencies in tab-delimited format, downloaded from AFND.

allis

Allele-specific expression

alphafold

Open source code for AlphaFold.

alphamissense

apptainer

Apptainer: Application containers for Linux

ariba

Antimicrobial Resistance Identification By Assembly

arriba

Fast and accurate gene fusion detection from RNA-Seq data

artemis2024

asereadcounter_star

Preprocessing sequencing data for allele-specific analysis

assemblytics

Assemblytics is a bioinformatics tool to detect and analyze structural variants from a genome assembly by comparing it to a reference genome.

atac-seq-pipeline

ENCODE ATAC-seq pipeline

aucplot

awesome-expression-browser

😎 A curated list of software and resources for exploring and visualizing (browsing) expression data 😎

awesome-microbes

List of computational resources for analyzing microbial sequencing data.

awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

awesome_spatial_omics

tools and notes for spatial omics

azimuth

A Shiny web app for mapping datasets using Seurat v4