vicory Goto Github PK

ais2-tutorials

ais2-tutorials-1

cmake-findfortran

Finds a fortran compiler, support libraries and companion C/CXX compilers if any.

courseinbiomedicalimageanalysisvisualizationandartificialintelligence

groups

itk

Insight Segmentation and Registration Toolkit -- Mirror

jcmsk

Binder links for JCMSK ITK tutorial

meshlib

meshtolabelmap

mfsda_python

Multivariate Functional Shape Data Analysis in Python (MFSDA_Python) is a Python based package for statistical shape analysis. A multivariate varying coefficient model is introduced to build the association between the multivariate shape measurements and demographic information and other clinical, biological variables. Statistical inference, i.e., hypothesis testing, is also included in this package, which can be used in investigating whether some covariates of interest are significantly associated with the shape information. The hypothesis testing results are further used in clustering based analysis, i.e., significant suregion detection. This MFSDA package is developed by Chao Huang and Hongtu Zhu from the BIG-S2 lab.

ors-tutorial

pycpns

Python implementation of composite principle nested spheres on S-Reps based statistical shape analysis

rigidalignment

rleimage

shapebasedinterpolation

The shape-based interpolation method described by Raya and Udupa in 1990 for three-dimensional images

shapepopulationviewer

ShapePopulationViewer is a software that allows you to dynamically interact with multiple surfaces at the same time

shapevariationanalyzer

Shape modeling and classification, extract shape features

slicer

Multi-platform, free open source software for visualization and image computing.

slicersalt

An open-source, free comprehensive software that will allow biomedical scientists to precisely locate shape changes in their imaging studies. This software called Slicer Shape AnaLysis Toolbox (SlicerSALT), will enhance the intuitiveness and ease of use for such studies, as well as allow researchers to find shape changes with higher statistical power. Altogether this constitutes a crucial resource for the imaging field that will enable many and important new findings in biomedical imaging studies.

slicersalt.github.io

SlicerSALT website

slicersegmentmesher

Create volumetric mesh from segmentation using Cleaver2 or TetGen

slicerskeletalrepresentation

Collection of Skeletal Model Extensions for 3D Slicer/SlicerSALT

spharm-pdm

Shape analysis has become of increasing interest to the medical community due to its potential to precisely locate morphological changes between healthy and pathological structures. SPHARM-PDM is a tool that computes point-based models using a parametric boundary description for the computing of Shape analysis.

thinshelldemonsitkexternalmodule

Thin Shell Demons ITK External Module

timelapse-opticalflow

tubetk

An open-source toolkit, led by Kitware, Inc., for the segmentation, registration, and analysis of tubes and surfaces in images.

vxl

A multi-platform collection of C++ software libraries for Computer Vision and Image Understanding.