Comments (4)
The example data file was corrupt and caused issues upon loading. To fix only need to download the TwoSzabo.Rdata file (or just reinstall). Let me know if you have any further issues/questions.
Also keep an eye out for an updated Ularcirc release later this week.
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Hi Ddiez,
This is an unexpected error. Can you confirm that on the Gene_view tab there is a pull down menu under "Data sets to analyse" (refer to image below). The default should be "Selected sample analysis". The error that you are reporting suggests this field is not populating with predefined entries.
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Yes, this is how it looks like:
After that I check Annotate with parental gene
and click Annotate
, which triggers the above error.
from ularcirc.
Downloading and replacing the file works perfect. Thanks! Reinstalling I guess you mean from github and not Bioconductor, since it doesn't seem to be updated there yet. But I'll keep an eye on the forthcoming update!
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Related Issues (20)
- Large File Silently Added To User Home Directory HOT 2
- Genomic Information Not Retrieved for Any Junction HOT 8
- installation error (Failed to install 'Ularcirc' from GitHub) HOT 1
- PDF Export Default Extension is CSV
- Result Table Column Explanations HOT 1
- installation
- Problem with BS junction sequences HOT 3
- Ularcirc crashing with STAR data and gene annotation HOT 3
- BS junction sequences: one-base shift HOT 2
- How to bring in custom annotations (BSgenome, TxDb)? HOT 4
- Couldn't visit Youtube HOT 2
- Bug reports when using Ensembl ID based de novo assembly transcriptome for the species other than human HOT 2
- Step 2 Not Working HOT 1
- Cannot upload new data HOT 5
- Essential Dependencies Not Installed Automatically HOT 1
- Annotate With Parental Gene Missing HOT 2
- Name Prefix Must End with Period But Not Documented HOT 1
- Chimeric File Crashes Ularcirc HOT 3
- Gene Count Table Requirements Missing HOT 2
- loadSTAR_chimeric Missing HOT 1
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