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ahk_scripts

My personal AutoHotKey scripts to emulate emacs/OSX behavior on windows

beckett-card-parser

bmtk

Brain Modeling Toolkit

boto

For the latest version of boto, see https://github.com/boto/boto3 -- Python interface to Amazon Web Services

bump-hunter

Multivariate implementation of the BumpHunter hypothesis test for ATLAS (1D BumpHunter: https://arxiv.org/pdf/1101.0390.pdf)

cheesecave

Web interface for Arduino powered cheese cave thermostat

dl4neurons

Data generation for neuron parameter DL

eyescan_common_sw_20140705

eyescan_workspace

entire xilinx workspace for eyescan software on OTC (SBU ATLAS LAr Calo 2015)

floating-led-message-fan

Code for PIC16 series microcontrollers (specifically, model f1826) to display a message that appears to "float" in the air, using a 7 LED bar attached to a fan with once per revolution interrupts for timing.

general_log_plus

A framework for processing/expanding MySQL's general_log

lean

Lean Theorem Prover

lsst_log_analysis_tool

A tool for viewing and analyzing MySQL's general_log for LSST database developers. Developed at SLAC, summer 2013 as a SULI intern

mf-analysis

Analysis of Missing Fundamental Rat ECoG data

mixer

Mixer -- Is a fixtures replacement. Supported Django, Flask, SqlAlchemy and custom python objects.

mner

Constructing and optimizing low-rank second-order maximum noise entropy (MNE) models

neural-lp-filter

Implementation of Bedard+Destexhe (2006, 2009) models of low-pass filtering of electrical signals through neural tissue

neuron-fem

Finite element modeling of neuronal extracellular potential

neuronmi

Signal propagation in neurons

nsds_soundgen

Tone pip generation for complex tones (Vyassa NSDS Lab initial experimentation)

nwbext_simulation_output

An extension developed in collaboration between the Soltesz lab and the Allen Institute for storing the output of large-scale simulations

process_ecog

pynwb

A Python API for working with Neurodata stored in the NWB Format

python_spectrograms_and_inversion

Spectrograms, MFCCs, and Inversion Demo in a jupyter notebook

root

The official ROOT repository

simple-retrosheet-python

Barebones framework for parsing MLB Retrosheet https://www.retrosheet.org/

terraform-provider-aws

Terraform AWS provider

vyassa_atlas

Tools (mostly ROOT scripts) for assorted one-off tasks related to ATLAS data analysis

yarr

Yet Another Rapid Reaodut

yarr-fw

Firmware repository for the PCIe FPGA cards used for the YARR system