Comments (4)
You are right, currently the singularity mode only supports the bind
option, not nv
. There are also a number of other options that could be supported.
It also does not support singularity run
, only singularity exec
.
Let me see if I can come out with a quick fix.
from sos.
This has been fixed in the 1500 branch, but I am not sure what to do with singularity run
since it runs the script built in the container, not the scripts we provide. If you actually meant docker exec --nv
, I can merge the branch and close the ticket.
from sos.
I'll be able to run with singularity exec
. Thank you so much for such a quick response!
from sos.
I have updated test and doc, and released sos 0.23.2.
from sos.
Related Issues (20)
- Inconsistent behavior of R_library() between released version 0.22.7 and current github 0.22.8 HOT 2
- Tasks with completed signature but missing output files are still ignored. HOT 8
- Error message of subtasks are not aggregated to tasks
- Remote signature does not appear to work
- MD5Sum for output, as an action option HOT 30
- Removing (corrupted) output files before the execution of steps.
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- Combined use of -r and -q
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- bug found in entrypoint version HOT 1
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