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Trent Hauck's Projects

arrow-rs icon arrow-rs

Official Rust implementation of Apache Arrow

biopython icon biopython

Official git repository for Biopython (originally converted from CVS)

bioserde icon bioserde

Bioinformatics format (De)Serialization

brrrr icon brrrr

Tools to process biological sequences and annotations to modern file formats.

candle icon candle

Minimalist ML framework for Rust

cblaster icon cblaster

Find clustered hits from a BLAST search

duckdb icon duckdb

DuckDB is an in-process SQL OLAP Database Management System

evidence icon evidence

Business intelligence as code: build polished reports with SQL and markdown

extension-template icon extension-template

Template for DuckDB extensions to help you develop, test and deploy a custom extension

flip icon flip

A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design

flyte icon flyte

Kubernetes-native workflow automation platform for complex, mission-critical data and ML processes at scale. It has been battle-tested at Lyft, Spotify, Freenome, and others and is truly open-source.

gcgc icon gcgc

An ML-feature processing library for biological sequences.

genomicranges icon genomicranges

Container class to represent genomic locations and support genomic analysis

gloo icon gloo

Data Project Management for IPython

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