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Chien Truong-Quoc's Projects

adamwr icon adamwr

Implements https://arxiv.org/abs/1711.05101 AdamW optimizer, cosine learning rate scheduler and "Cyclical Learning Rates for Training Neural Networks" https://arxiv.org/abs/1506.01186 for PyTorch framework

amfe icon amfe

Nonlinear Finite Element Code for structural applications with simplicity in mind.

annotated_deep_learning_paper_implementations icon annotated_deep_learning_paper_implementations

๐Ÿง‘โ€๐Ÿซ 59 Implementations/tutorials of deep learning papers with side-by-side notes ๐Ÿ“; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, ...), gans(cyclegan, stylegan2, ...), ๐ŸŽฎ reinforcement learning (ppo, dqn), capsnet, distillation, ... ๐Ÿง 

athena icon athena

A GUI for automated sequence design of wireframe scaffolded DNA origami

atomic2field icon atomic2field

Codes for translating structural defects to atomic properties

awesome-graph-pde icon awesome-graph-pde

This is a collection of resources about partial differential equations, deep learning, graph neural networks, dynamic system simulation.

awesome-neural-ode icon awesome-neural-ode

A collection of resources regarding the interplay between differential equations, deep learning, dynamical systems, control and numerical methods.

awesome-optimal-transport icon awesome-optimal-transport

A list of awesome papers and cool resources on optimal transport and its applications in general! As you will notice, this list is currently mostly focused on optimal transport for machine learning topics.

b-pinns icon b-pinns

Pytorch implementation of Bayesian physics-informed neural networks

bio-diffusion icon bio-diffusion

A PyTorch hub of denoising diffusion probabilistic models designed to generate novel biological data

cfc icon cfc

Solution of neural ODEs

cgcf-confgen icon cgcf-confgen

:test_tube: Learning Neural Generative Dynamics for Molecular Conformation Generation (ICLR 2021)

cgcnn icon cgcnn

Crystal graph convolutional neural networks for predicting material properties.

chroma-pytorch icon chroma-pytorch

Implementation of Chroma, generative models of protein using DDPM and GNNs, in Pytorch

conditional_vae icon conditional_vae

conditional variational autoencoder written in Keras [not actively maintained]

d3-force icon d3-force

Force-directed graph layout using velocity Verlet integration.

ddpm-proteins icon ddpm-proteins

A denoising diffusion probabilistic model (DDPM) tailored for conditional generation of protein distograms

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