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Repo structure about occ-cube-alien HOT 3 OPEN

trias-project avatar trias-project commented on June 25, 2024
Repo structure

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damianooldoni avatar damianooldoni commented on June 25, 2024

we should add notebook for filtering post download... (e.g. absences, coordinate issues) or just adding the filtering at the begin of assign_coord.ipynb`.

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damianooldoni avatar damianooldoni commented on June 25, 2024

@peterdesmet : up to now we were used to put the file with all triggered downloads (gbif_downloads.tsv) in ./data/output. However, ./data/output doesn't exist anymore, changed to the standard datascience cookiecutter folder ./data/processed, which contains:

The final, canonical data sets for modeling.

I don't like to mix the cubes with this file with all GBIF downloads.
So, should we put it in ./data/processed or maybe use the folder ./references, which contains

Data dictionaries, manuals, and all other explanatory materials.

This is also not completely correct but maybe it is a better solution. The pipeline for triggering a download is ready in branch https://github.com/trias-project/occ-processing/tree/add_download_pipeline_belgium. This is the only doubt I have before PR.

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peterdesmet avatar peterdesmet commented on June 25, 2024

I would put in data/interim

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