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amr-asia-23

Learn antimicrobial susceptibility testing techniques and how whole-genome sequencing and bioinformatics can be used to understand AMR

amr-bio-africa-2022

binderbash

Bash notebooks on Binder

comparative_genomics

Micro 612 genomics workshop

eeob563-spring2023

fizzbuzz

There are many kinds of implementation for FizzBuzz!

fizzbuzz-perl

fizzbuzz-python

genepilac2023

intro-to-rnaseq-hpc-o2

This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster

jupyterhub-training

A guide to using Jupyterhub for the training modules supplied by Pathogen Informatics

longread_tutorials

Workflows and tutorials for LongRead analysis with specific focus on Oxford Nanopore data

ngs-course.github.io

NGS course

pathfind-training

pathogen-informatics-training

pathogens-vm

To build a virtual machine with some Sanger pathogens software installed

rnatrans_23

sars-cov-2_b4b

This is a repository for development of the SARS-CoV-2 Bioinformatics for Beginners Course

shell-novice

The Unix Shell

singlecell_23

training-collection

Collection of bioinformatics training materials

tutorials

In this repo you will find demos and tutorials prepared by members of the CBIB. Feel free to use them for non-commercial activities given that you give proper credit. Have fun!

unix-shell

Materials for "Introduction to Unix Shell" course.

viralbioinflac2022

The repository for the Viral Genomics and Bioinformatics 2022 course

wac_unix

wwpg_2022

Working with Pathogen Genomes 2022