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titaiwangms avatar titaiwangms commented on July 24, 2024 1

Hi, @Payamdel

Thanks for replying. I am working on it.
It seems like when I was focusing on the two main pipelines in anamiR, I forgot to update this function as well. Anyway, I will update it ASAP.

Many Thanks,
Ti-Tai

from anamir.

Payamdel avatar Payamdel commented on July 24, 2024

Nice job! I can see that you have successfully updated the function!
If I understood the code correctly, there is no option to correct for multiple hypothesis testing. Is it correct?

Moreover, the actual p-values are not reported in the result. Instead, True or False are presented. It would be informative to report the actual values.

from anamir.

titaiwangms avatar titaiwangms commented on July 24, 2024

Hi, @Payamdel
I am not sure if you are talking about post hoc test for anova. If it is, there are three methods you can choose, including "scheffe.test", "HSD.test", "duncan.test".

And that is really a great suggestion about showing P-value, appreciate that. I might update it later.

from anamir.

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