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thoelken's Projects

bioinfo-toolbox icon bioinfo-toolbox

A repository of scripts and tools for daily bioinformatic analysis of sequencing data.

chiasm icon chiasm

Detection and Quantification of circRNAs in Transcriptome Data, case Study on Honeybees

circbee icon circbee

Identification of circRNA in honeybee

dataplan icon dataplan

DataPLAN is the Data Management Plan (DMP) generator developed in DataPLANT

dotfiles icon dotfiles

my personal setup for all of my machines

gedit-color-schemes icon gedit-color-schemes

Color schemes for Gedit and apps that use gtksourceview to render the syntax highlight.

metag icon metag

preprocessing and classification of metagenomic data

piseq icon piseq

single cell sequencing with DIY microfluidics and a RasPi

plantscan icon plantscan

Analysis of infected plants in a DIY plant scanner based on video and photos

pyvector icon pyvector

Simple SVG classes for easier vector graphics creation.

u-track icon u-track

Multiple-particle tracking designed to (1) track dense particle fields, (2) close gaps in particle trajectories resulting from detection failure, and (3) capture particle merging and splitting events resulting from occlusion or genuine aggregation and dissociation events

xspect icon xspect

Extraction tool for mass spectrometry spectra from Thermo raw files

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