theosanderson Goto Github PK
Name: Theo Sanderson
Type: User
Company: The Francis Crick Institute
Bio: Full stack pathogen geneticist
Twitter: theosanderson
Location: London, UK
Blog: http://theo.io
Theo Sanderson's Projects
2020-cov-tracing
Combined scenarios for COVID transmission
add_biosample_metadata_to_fastqdl_json
Adds biosample metadata from ENA to fastq-dl downloads
adhoc_covid
adhoc_malaria
advanced_ot2
alive-progress
A new kind of Progress Bar, with real-time throughput, ETA, and very cool animations!
amplicon72
amplicon_72
analyse_371_reversions
app
🤖 A GitHub App to automate acknowledging contributors to your open source projects
armadillin
armadillin-model
Trained model for armadillin
asexualscreen
The analysis presented in "Functional Profiling of a Plasmodium Genome Reveals an Abundance of Essential Genes" (Bushell, Gomes, Sanderson, et al. Cell. 2017)
autoscaler
Autoscaling components for Kubernetes
awesome-genome-visualization
A list of interesting genome browser or genome-browser-like implementations
basicepiscope
bigtreetech-skr-mini-e3
BIGTREETECH SKR-mini-E3 motherboard is a ultra-quiet, low-power, high-quality 3D printing machine control board. It is launched by the 3D printing team of Shenzhen BIGTREE technology co., LTD. This board is specially tailored for Ender 3 printer, perfectly replacing the original Ender3 printer motherboard.
biobrick2genbank
PHP web tool to convert BioBrick XML to Genbank
bioconda-recipes
Conda recipes for the bioconda channel.
biorxivmob
blueskybot_malariapapers
bte
Cython API for the Mutation Annotated Tree (MAT) Online Phylogenetics Toolkit (In Development)
buildroot
The Opentrons fork of buildroot for building the OT2 system. Our default branch is opentrons-develop.
ceph
Ceph is a distributed object, block, and file storage platform
chron_analysis
chron_simulations
chronumental
Estimating time trees from very large phylogenies
cif-import
This module reads image data from compensated image files (.cif files) into a tensor in python.
cl3-rota
we use this for constructing the swab-inactivation rota
cluster_scripts
Scripts to investigate the SUKS cluster
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