Why are genes classified under sequence feature about pyontutils

[memartone]

Huang uses Sst that is a sequence feature which is why I suspect that it is not coming back with the query.

[tgbugs]

I looked into how genes were modelled in other ontologies with an eye toward unifying their modelling with epigenetic modifications. Sequence feature is what others use and from a discussion with Marga Behrens it seemed that that was also how the epi folks are thinking about what they are measuring.

[memartone]

But it is not used consistently. So it is causing our query to fail. So pick one or the other.

…

On May 16, 2019, at 9:21 AM, Tom Gillespie ***@***.***> wrote: I looked into how genes were modelled in other ontologies with an eye toward unifying their modelling with epigenetic modifications. Sequence feature is what others use and from a discussion with Marga Behrens it seemed that that was also how the epi folks are thinking about what they are measuring. — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#59?email_source=notifications&email_token=ABSGOPI4V457IHS6DYC32LLPVWCYVA5CNFSM4HNN7SD2YY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGODVSKUUY#issuecomment-493136467>, or mute the thread <https://github.com/notifications/unsubscribe-auth/ABSGOPN3QNZ5CV3LG75WACLPVWCYVANCNFSM4HNN7SDQ>.

[tgbugs]

Query issue resolved via phenotype indicators.