testgroup-bnl Goto Github PK

canopyrt

A sandbox for exploring leaf/canopy RT representations in LSMs

csvqa

Tools for QA checks, fixes and post-processing for CSV files

ely_etal_2019_journalofexperimentalbotany

Leaf-level Spectra-trait PLSR models to estimate key leaf traits associated with source–sink balance and carbon–nitrogen status using leaf optical properties

example_gee_uas_scripts

Small repository of example Google Earth Engine Jupyter Notebooks

exploringcogs

A sandbox of scripts and data to explore the use of cloud-optimized geotiff datasets to facilitate direct data ingest into analysis workflows

fcp

FACE Control Program

gee_examples

A small repo containing GEE, rgee, and Python GEE examples

gsti

A project focused on the development of generalized spectra-trait models for the prediction of leaf photosynthetic capacity. This includes models focused on the prediction of leaf nitrogen, leaf mass per area (LMA), leaf water content (LWC), Vcmax, Jmax and dark respiration.

hytools_helpers

A set of examples and scripts to help with using EnSpec_hytools

jsonfilefield

lamour_et_al_2021_letter_on_marquez_et_al_2021_paper

Implementation of Marquez et al. 2021 new gas exchange theory

leafgasexchange

An R package for fitting and simulating leaf level gas exchange

matlab-canopy_photosynthesis

Testbed for canopy scaling and modeling of Photosynthesis and GPP

meeting_demos

Repository for examples used in meetings or presentations

modacs

Modular Data Collection System

ngeearctic_elm_containers

E3SM Land Model (ELM) containers for NGEE-Arctic

ngsapflux

Next-generation Sap Flux. Repository for storing schematics, code, and other information related to the development of custom sap flux sensors

ngsapflux_r

An R package for working with and processing sap flux generated using the BNL TEST group NGSapFlux sensor package

nvbbcc

Initial location for developing workflow code for the NVBBCC effort. This location is expected to migrate to a NVBBCC organization at some point

pca10059_picam

picam

The PiCam time-lapse camera system. A nRF52840 managed, low power sensor node and Raspberry Pi camera system designed for autonomous operations in remote regions for the collection of vegetation phenology data

r-canopy_photosynthesis

Testbed for canopy scaling and modeling of Photosynthesis and GPP

r-gasexchange

Simple scripts for processing LiCor 6400 gas exchange data

r-unispecdc-tools

A toolkit for processing UniSpec-DC spectral files

rogers_etal_ngeearctic_lightresponse

Repository containing LiCor photosynthetic light response curve data, R scripts for fitting the data, and our script for calculating leaf absorptance from measured reflectance

spectratrait

A tutorial R package for illustrating how to fit, evaluate, and report spectra-trait PLSR models. The package provides functions to enhance the base functionality of the R pls package, identify an optimal number of PLSR components, standardize model validation, and vignette examples that utilize datasets sourced from EcoSIS (ecosis.org)

unispec_processing

Python code for processing the output of the Unispec-DC spectrometer

unispec_trigger

Python scripts for aquiring data from Unispec-DC spectrometer

viskari_etal_ed2_radiation_uncertainty

The influence of canopy radiation parameter uncertainty on model projections of terrestrial carbon and energy cycling

wu_etal_2019_newphytologist

Leaf-level spectra-trait PLSR models to estimate leaf age and Vcmax of tropical tree species using measurements of leaf reflectance