Comments (6)
let's then get all the publications and create the treatments, link them if possible so you @nfranz can use the treatment as bases for looking into the bases of the mapping in the publications above? Can you get all the mentioned publications? This would allow to understand the effort it takes to produce the treatments
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let me get the published article so we can process it, and if I find the time and access, also the articles that are cited and part of the mapping. But already this points out, how irrealistic the current system is: I need to get the article. The article is closed access, and the one linked is not the finally published article that should be used because it is the digital copy of the DOI.
Then, I need to find the other articles, if I have access to read and find out - instead of having a JSON version or similar that allows automatic mapping....
We also pushed the notion, that each treatment should be accompanied by materials citations, best in DWC so this can be done by machine. There is not way to create these maps at scale based on legacy publications.
Ask yourself, how much time does it take to create one such mapping, how much of the mapping is based on inference.
the only thing I can say, stop publishing this way, make it as a criteria that only a format is good enough that allows this sort of mapping by machine.
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Reading along. At ASU we presently are funded to advance research into several of these issues. So, if this particular example is of greater interest, we can likely allocate that effort.
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@mdoering
Nice example. Nice use of RCC-5 type Taxon Relationships. This discussion also illustrates the need and urgency of having a specification for exchanging references within our domain.
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This is just a translation exercise, quite likely. Here's that 2012 paper's taxonomy vs. the Smith et al. (2006) taxonomy. (Using Euler/X input syntax; the improvement of which is of course an objective for this group.)
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I made an RDF version of the taxonomic concept relationships that @nfranz illustrated above, using the TDWG ontology, here. Simplified spaghetti-gram below.
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Related Issues (20)
- Use of this repo - TNC vs. TCS2 HOT 5
- LSIDs for taxonomic names live again HOT 42
- property:{TO BE NAMED} to indicate the novel status of a taxon in a publication HOT 20
- Teleconference 14 January 2020 20:00 UTC
- The need for "intersects" as a TNU relationship type in addition to the five RCC-5 types HOT 28
- Proposed: 'protonym' property on TaxonomicNameUsage HOT 1
- Vernacular names HOT 13
- More appropriate name for TaxonRelationshipAssertion class HOT 60
- Agents and References HOT 14
- Teleconference 24 March 2020 20:00 UTC HOT 1
- TNU Hackathon 7 April 2020 HOT 5
- Task group? HOT 14
- Teleconference 26/27 May 2020 HOT 7
- "Taxon" ID that does not change unless circumscription has changed HOT 27
- How to indicate which TNUs are current HOT 21
- RCC5 relation intersects HOT 4
- Should taxonomicName be represented as a Subclass of taxonomicNameUsage HOT 45
- Proposal: add properties that represent TNU relationships HOT 2
- Merging Discussions
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